Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mdh malate dehydrogenase (nad) | Cabys_3850 | Q2IIC2 | + | 4558623 - 4559579 | 34325.1 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | Cabys_3851 | Q3ADL7 | + | 4559671 - 4560348 | 24580.5 |
| sprt-like family protein | Cabys_3852 | Not Available | + | 4560625 - 4561314 | 27078.4 |
| doubled cxxch domain-containing protein | Cabys_3853 | Not Available | - | 4561360 - 4561977 | 22454.6 |
| doubled cxxch domain-containing protein | Cabys_3854 | Not Available | - | 4562072 - 4563337 | 47260.4 |
| hypothetical protein | Cabys_3855 | Not Available | - | 4563347 - 4565302 | 77367.1 |
| nhl repeat domain protein | Cabys_3856 | Not Available | - | 4565893 - 4566963 | 40856.5 |
| hypothetical protein | Cabys_3857 | Not Available | + | 4566990 - 4567103 | 4619.52 |
| doubled cxxch domain-containing protein | Cabys_3858 | Not Available | - | 4567104 - 4567718 | 21224.5 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | Cabys_3859 | Q06065 | - | 4567973 - 4569349 | 52481.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.