Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein spoiim, required for sporulation | Cabys_3824 | Not Available | + | 4523374 - 4523988 | 23364.1 |
| putative hydrolase of the had superfamily | Cabys_3825 | P0A8Y3 | - | 4523994 - 4524611 | 23591.2 |
| hypothetical protein | Cabys_3826 | Not Available | - | 4524818 - 4525183 | 14177.4 |
| pas domain s-box-containing protein | Cabys_3827 | Not Available | - | 4525263 - 4527626 | 92107.5 |
| tetratricopeptide repeat-containing protein | Cabys_3828 | Not Available | + | 4528302 - 4529237 | 36729.6 |
| carbamoyl-phosphate synthase large subunit | Cabys_3829 | O93937 | - | 4529285 - 4532482 | 118879.0 |
| cara carbamoyl-phosphate synthase small subunit | Cabys_3830 | Q2U913 | - | 4532505 - 4533581 | 40203.0 |
| hypothetical protein | Cabys_3831 | Not Available | - | 4533907 - 4534035 | 4734.27 |
| geranylgeranyl reductase family | Cabys_3832 | Q8TUV8 | - | 4534244 - 4535536 | 48430.0 |
| acetyltransferase | Cabys_3833 | A9A1Y1 | - | 4535593 - 4537689 | 76680.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.