Caldithrix abyssi LF13

Kingdom

Pseudomonadati

Phylum

Calditrichota

Class

Calditrichia

Order

Calditrichales

Family

Calditrichaceae

Genus

Caldithrix

Description

Taxonomy

KingdomPseudomonadati
PhylumCalditrichota
ClassCalditrichia
OrderCalditrichales
FamilyCalditrichaceae
GenusCaldithrix
SpeciesCaldithrix abyssi
StrainLF13

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caldithrix abyssi LF13

Accession NumberCP018099.1

Gene Summary

Adenine Count

1364352 bp

Thymine Count

1369075 bp

Guanine Count

1122865 bp

Cytosine Count

1122249 bp

Genome Length

4978541 bp

Protein-coding Genes

4204 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
cas1 crispr-associated protein, cas1 familyCabys_3804B5YIU9-4501387 - 450239138866.2
crispr-associated exonuclease, cas4 familyCabys_3805Q57822-4502434 - 450294320089.2
crispr-associated endonuclease/helicase cas3Cabys_3806O27158-4502959 - 4505676106273.0
crispr-associated protein cas5hCabys_3807Q6ZJM9-4505657 - 450644830455.8
crispr-associated protein csh2Cabys_3808Not Available-4506451 - 450739836137.9
crispr-associated protein csh1Cabys_3809Not Available-4507433 - 450925672251.9
crispr-associated endoribonuclease cas6Cabys_3810Q57820-4509280 - 451007731220.8
transcriptional regulator, tetr familyCabys_3811Q8X4Z7+4510352 - 451099024747.2
outer membrane protein tolcCabys_3812Not Available+4510987 - 451229749815.8
hlyd family secretion proteinCabys_3813Q9L9D4+4512294 - 451317832981.4

Displaying genes 3841 – 3850 of 4263 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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