Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protease ftsh subunit hflc | Cabys_3794 | O51222 | - | 4487285 - 4488235 | 36828.3 |
| protease ftsh subunit hflk | Cabys_3795 | O83151 | - | 4488228 - 4489220 | 37940.6 |
| membrane associated serine protease, rhomboid family | Cabys_3796 | Q8VZ48 | - | 4489356 - 4490018 | 25109.0 |
| peptidase family m23 | Cabys_3797 | Q56131 | - | 4490021 - 4492237 | 84615.6 |
| hypothetical protein | Cabys_3798 | Not Available | - | 4492827 - 4492958 | 4572.42 |
| dihydrolipoamide dehydrogenase | Cabys_3799 | P0A9P2 | - | 4493060 - 4494487 | 51395.4 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | Cabys_3800 | P45118 | - | 4494510 - 4495838 | 47957.6 |
| pyruvate dehydrogenase e1 component | Cabys_3801 | Q59637 | - | 4495876 - 4498548 | 100942.0 |
| hypothetical protein | Cabys_3802 | Not Available | - | 4498566 - 4498679 | 4178.08 |
| cas2 crispr-associated protein, cas2 family | Cabys_3803 | Q8U1T8 | - | 4501103 - 4501366 | 10307.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.