Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Cabys_3774 | Not Available | + | 4468651 - 4469406 | 29399.9 |
| hypothetical protein | Cabys_3775 | Not Available | + | 4469403 - 4470506 | 42666.9 |
| binding-protein-dependent transport system inner membrane component | Cabys_3776 | Not Available | + | 4470503 - 4471441 | 35655.6 |
| abc-type glutathione transport system atpase component, contains duplicated atpase domain | Cabys_3777 | P33916 | + | 4471438 - 4472934 | 57110.7 |
| transposase | Cabys_3778 | Not Available | - | 4473144 - 4474559 | 55464.4 |
| hypothetical protein | Cabys_3779 | Not Available | - | 4474580 - 4474939 | 14010.2 |
| selt/selw/selh selenoprotein domain-containing protein | Cabys_3780 | Not Available | - | 4475623 - 4475793 | 6610.98 |
| aroc chorismate synthase | Cabys_3781 | A6TL06 | - | 4475863 - 4477026 | 42970.1 |
| phosphoesterase recj domain-containing protein | Cabys_3782 | Q8DTN6 | - | 4477029 - 4478039 | 37974.0 |
| isocitrate dehydrogenase (nad+) | Cabys_3783 | Q945K7 | - | 4478056 - 4479081 | 36883.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.