Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dnaj domain-containing protein | Cabys_3764 | B9MJZ0 | - | 4461283 - 4461696 | 16472.6 |
| hypothetical protein | Cabys_3765 | Not Available | + | 4461911 - 4462048 | 4878.19 |
| hypothetical protein | Cabys_3766 | Not Available | + | 4462277 - 4462393 | 4539.56 |
| glycosyltransferase involved in cell wall bisynthesis | Cabys_3767 | Q4UM29 | - | 4462413 - 4463255 | 32705.7 |
| nucleoside phosphorylase | Cabys_3768 | O51931 | - | 4463252 - 4463851 | 22044.0 |
| hypothetical protein | Cabys_3769 | Not Available | - | 4464004 - 4464165 | 6276.09 |
| hypothetical protein | Cabys_3770 | Not Available | + | 4464302 - 4464520 | 8270.2 |
| carbohydrate family 9 binding domain-like | Cabys_3771 | Not Available | + | 4464905 - 4467064 | 83266.5 |
| ppgpp synthetase catalytic domain-containing protein (rela/spot-type nucleotidyltransferase) | Cabys_3772 | P39583 | - | 4467061 - 4468293 | 48080.2 |
| hypothetical protein | Cabys_3773 | Not Available | + | 4468512 - 4468631 | 4631.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.