Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ethanolamine utilization protein eutm | Cabys_344 | P0ABF5 | + | 396197 - 396484 | 9808.06 |
| ethanolamine utilization protein eutm | Cabys_345 | P0ABF5 | + | 396502 - 396792 | 9961.28 |
| acetaldehyde dehydrogenase | Cabys_346 | P41793 | + | 396819 - 398228 | 50967.4 |
| ethanolamine utilization protein eutj | Cabys_347 | P77277 | + | 398246 - 399058 | 29492.5 |
| na+-translocating ferredoxin:nad+ oxidoreductase rnf, rnfc subunit | Cabys_348 | B1VB77 | + | 399061 - 400404 | 48852.5 |
| carboxysome shell and ethanolamine utilization microcompartment protein ccml/eutn | Cabys_349 | Q9XDM8 | + | 400407 - 400958 | 18842.1 |
| iron complex transport system atp-binding protein | Cabys_350 | Q81LM1 | - | 402152 - 402955 | 29846.7 |
| transposase domain (duf772) | Cabys_351 | Not Available | + | 403329 - 404915 | 61382.2 |
| hypothetical protein | Cabys_352 | Not Available | - | 405691 - 406314 | 23952.4 |
| ribonucleoside-diphosphate reductase class ii | Cabys_353 | Q9HI70 | - | 406338 - 408815 | 93811.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.