Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein involved in the export of o-antigen and teichoic acid | Cabys_3744 | P33699 | - | 4437969 - 4439438 | 55738.7 |
| aroq 3-dehydroquinate dehydratase | Cabys_3745 | B4SGR9 | - | 4439448 - 4439876 | 15952.1 |
| phosphoribosyl 1,2-cyclic phosphate phosphodiesterase | Cabys_3746 | Q7MUY1 | - | 4439890 - 4440657 | 28909.9 |
| arob 3-dehydroquinate synthase | Cabys_3747 | B8GPV3 | - | 4440657 - 4441745 | 40689.8 |
| arok shikimate kinase | Cabys_3748 | Q8KCL0 | - | 4441732 - 4442292 | 21266.9 |
| rnhb rnase hii | Cabys_3749 | Q18BC9 | - | 4442307 - 4442981 | 25101.5 |
| atp-dependent helicase/nuclease subunit a | Cabys_3750 | A8FBR1 | - | 4444133 - 4447708 | 138397.0 |
| atp-dependent helicase/dnase subunit b | Cabys_3751 | A6TVN9 | - | 4447752 - 4451024 | 125455.0 |
| glutamine cyclotransferase | Cabys_3752 | Q4R6F3 | + | 4451229 - 4452818 | 60613.4 |
| hypothetical protein | Cabys_3753 | Not Available | - | 4453467 - 4453667 | 7444.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.