Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lold lipoprotein-releasing system atp-binding protein | Cabys_3725 | Q39T41 | - | 4413947 - 4414636 | 25619.2 |
| lipoprotein-releasing system permease protein | Cabys_3726 | Q9PEF2 | - | 4414640 - 4415875 | 46113.4 |
| lyss lysyl-trna synthetase, class ii | Cabys_3727 | B3QMN9 | - | 4415872 - 4417365 | 58356.8 |
| prfb bacterial peptide chain release factor 2 (brf-2) | Cabys_3728 | B7IE81 | - | 4417490 - 4418560 | 41154.7 |
| hypothetical protein | Cabys_3729 | Not Available | - | 4418839 - 4419978 | 44357.8 |
| hypothetical protein | Cabys_3730 | Not Available | - | 4420051 - 4421235 | 45823.3 |
| slbb domain-containing protein | Cabys_3731 | Not Available | - | 4421309 - 4421809 | 18296.6 |
| hypothetical protein | Cabys_3732 | Not Available | - | 4421809 - 4422501 | 26595.1 |
| hypothetical protein | Cabys_3733 | Not Available | - | 4422596 - 4423606 | 37787.5 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_3734 | B2RKU0 | - | 4423603 - 4428642 | 189755.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.