Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Cabys_3705 | Not Available | - | 4389574 - 4390302 | 28802.7 |
| hypothetical protein | Cabys_3706 | Not Available | - | 4390439 - 4390558 | 4537.7 |
| dna polymerase iii alpha subunit | Cabys_3707 | Not Available | + | 4390722 - 4390859 | 5103.17 |
| dtdp-4-dehydrorhamnose reductase | Cabys_3708 | D4GU71 | - | 4391037 - 4391930 | 32980.8 |
| hypothetical protein | Cabys_3709 | Not Available | - | 4391933 - 4392661 | 28499.7 |
| hypothetical protein | Cabys_3710 | Not Available | - | 4392677 - 4393708 | 39451.8 |
| component of the tol biopolymer transport system | Cabys_3711 | B2SET5 | - | 4393735 - 4396905 | 123544.0 |
| m6 family metalloprotease domain-containing protein/por secretion system c-terminal sorting domain-containing protein | Cabys_3712 | Not Available | - | 4397033 - 4400005 | 109539.0 |
| hypothetical protein | Cabys_3713 | Not Available | - | 4400088 - 4401179 | 40124.9 |
| hypothetical protein | Cabys_3714 | Q1GZI2 | - | 4401440 - 4401604 | 6377.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.