Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transposase domain (duf772) | Cabys_3695 | Not Available | + | 4380163 - 4381749 | 61382.2 |
| hypothetical protein | Cabys_3696 | Not Available | - | 4382203 - 4383063 | 33365.3 |
| dna polymerase iii alpha subunit | Cabys_3697 | Not Available | + | 4383354 - 4383560 | 7963.74 |
| protein of unknown function (duf2442) | Cabys_3698 | Not Available | - | 4383793 - 4384098 | 11458.6 |
| hypothetical protein | Cabys_3699 | Not Available | - | 4384141 - 4384263 | 4773.21 |
| putative nuclease of the rnase h fold, hicb family | Cabys_3700 | Q9HK40 | + | 4384867 - 4385070 | 7436.87 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_3701 | P0A1J0 | - | 4385311 - 4385607 | 11278.6 |
| hypothetical protein | Cabys_3702 | P9WLM8 | + | 4385650 - 4386795 | 44498.9 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_3703 | Not Available | - | 4387166 - 4388932 | 68097.6 |
| hypothetical protein | Cabys_3704 | Not Available | - | 4389078 - 4389446 | 14327.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.