Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Cabys_3685 | Not Available | + | 4368933 - 4370093 | 44628.7 |
| iron-only hydrogenase maturation protein hydg | Cabys_3686 | P30140 | + | 4370261 - 4371685 | 54444.3 |
| aspartate ammonia-lyase | Cabys_3687 | P26899 | + | 4371695 - 4373101 | 51268.0 |
| (fefe) hydrogenase h-cluster maturation gtpase hydf | Cabys_3688 | Q7M7W8 | + | 4373098 - 4374327 | 45641.8 |
| two-component system, ntrc family, response regulator pilr | Cabys_3689 | P06628 | - | 4374348 - 4374716 | 14036.7 |
| transporter, sss family | Cabys_3690 | Q5E733 | + | 4374803 - 4376302 | 54347.1 |
| hypothetical protein | Cabys_3691 | P9WLM8 | - | 4377370 - 4378494 | 43840.6 |
| hypothetical protein | Cabys_3692 | Not Available | + | 4378718 - 4378861 | 5595.9 |
| n-carbamoylputrescine amidase | Cabys_3693 | Q9XGI9 | - | 4378904 - 4379719 | 30794.8 |
| hypothetical protein | Cabys_3694 | Not Available | - | 4379716 - 4379841 | 4720.86 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.