Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rex redox-sensing transcriptional repressor | Cabys_3675 | Q3AF82 | + | 4358612 - 4359238 | 23346.8 |
| nadh-quinone oxidoreductase subunit e | Cabys_3676 | Q1RJJ1 | + | 4359254 - 4359733 | 17834.8 |
| nad(p)-dependent iron-only hydrogenase diaphorase component flavoprotein | Cabys_3677 | Q46507 | + | 4359741 - 4361693 | 71552.2 |
| nad(p)-dependent iron-only hydrogenase catalytic subunit | Cabys_3678 | Q46508 | + | 4361708 - 4363429 | 63142.5 |
| 4fe-4s dicluster domain-containing protein | Cabys_3679 | P16497 | + | 4363429 - 4365453 | 75439.2 |
| response regulator receiver domain-containing protein | Cabys_3680 | P37478 | + | 4365656 - 4366051 | 15161.3 |
| signal transduction histidine kinase | Cabys_3681 | P0A601 | + | 4366051 - 4367193 | 43038.5 |
| putative domain 1-containing protein | Cabys_3682 | O67879 | + | 4367277 - 4367663 | 14042.3 |
| hypothetical protein | Cabys_3683 | Not Available | + | 4367711 - 4367842 | 5003.32 |
| biotin synthase | Cabys_3684 | Q9X0Z6 | + | 4367844 - 4368899 | 40176.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.