Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | Cabys_3665 | Q5BD38 | - | 4345968 - 4349321 | 124752.0 |
| zinc carboxypeptidase | Cabys_3666 | P0ACV7 | + | 4349527 - 4350324 | 29768.6 |
| miniconductance mechanosensitive channel | Cabys_3667 | P0AAT4 | - | 4350994 - 4352235 | 47798.2 |
| peptidase family s51 | Cabys_3668 | Q4QMU5 | - | 4352232 - 4352927 | 25886.1 |
| peroxiredoxin q/bcp | Cabys_3669 | P0AE54 | + | 4353293 - 4353802 | 19024.0 |
| hrca heat-inducible transcription repressor hrca | Cabys_3670 | B3EPC5 | + | 4354204 - 4355229 | 39158.9 |
| grpe molecular chaperone grpe | Cabys_3671 | B3QTT2 | + | 4355256 - 4355816 | 22009.3 |
| dnaj molecular chaperone dnaj | Cabys_3672 | B3EE31 | + | 4355825 - 4356985 | 42260.5 |
| comea protein | Cabys_3673 | Q57134 | + | 4357028 - 4357492 | 17230.2 |
| hypothetical protein | Cabys_3674 | Not Available | - | 4358001 - 4358327 | 12785.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.