Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative transposase | Cabys_3600 | Not Available | - | 4299657 - 4301546 | 72768.0 |
| hypothetical protein | Cabys_3601 | Not Available | - | 4301852 - 4302319 | 17709.5 |
| hypothetical protein | Cabys_3602 | Not Available | - | 4302386 - 4302556 | 6475.16 |
| bacteriophage ci repressor helix-turn-helix domain-containing protein | Cabys_3603 | P08707 | + | 4302625 - 4303095 | 18019.1 |
| two-component system, ntrc family, sensor histidine kinase kinb | Cabys_3604 | Q45614 | + | 4303335 - 4303649 | 11556.9 |
| two-component system, ntrc family, response regulator algb | Cabys_3605 | Q06065 | + | 4303652 - 4304980 | 50578.7 |
| protein tonb | Cabys_3606 | Q9RMT3 | + | 4305211 - 4305822 | 23165.3 |
| hypothetical protein | Cabys_3607 | Not Available | + | 4305860 - 4305976 | 4467.5 |
| transposase domain (duf772) | Cabys_3608 | Not Available | - | 4306820 - 4308406 | 61382.2 |
| hypothetical protein | Cabys_3609 | Not Available | - | 4308528 - 4308662 | 5104.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.