Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | Cabys_3540 | Not Available | - | 4235226 - 4236017 | 30250.0 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_3541 | V9TSX0 | - | 4236036 - 4246691 | 396715.0 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | Cabys_3542 | Q04850 | + | 4247027 - 4249537 | 96790.5 |
| two component, sigma54 specific, transcriptional regulator, fis family | Cabys_3543 | Q06065 | + | 4249619 - 4250956 | 50503.7 |
| his kinase a (phospho-acceptor) domain-containing protein | Cabys_3544 | Q54YZ9 | - | 4251291 - 4253627 | 87537.1 |
| hypothetical protein | Cabys_3545 | Not Available | - | 4253950 - 4254102 | 6234.91 |
| transposase | Cabys_3546 | Q52873 | + | 4254652 - 4255914 | 49666.8 |
| type iii restriction enzyme | Cabys_3547 | Q5ZND2 | - | 4256011 - 4258896 | 112379.0 |
| adenine-specific dna-methyltransferase | Cabys_3548 | P08763 | - | 4258909 - 4260900 | 77033.8 |
| hypothetical protein | Cabys_3549 | Not Available | - | 4261069 - 4261236 | 6194.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.