Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Cabys_3530 | Not Available | + | 4222254 - 4222406 | 5998.23 |
| ggdef domain-containing protein, diguanylate cyclase (c-di-gmp synthetase) or its enzymatically inactive variants | Cabys_3531 | Not Available | - | 4222396 - 4224003 | 62005.9 |
| sigma-54 interaction domain-containing protein | Cabys_3532 | P26047 | - | 4224024 - 4225337 | 50243.5 |
| periplasmic chaperone for outer membrane proteins sura | Cabys_3533 | Q3JAF1 | - | 4225340 - 4226620 | 49980.6 |
| parvulin-like peptidyl-prolyl isomerase | Cabys_3534 | Q8XHK0 | - | 4226638 - 4227474 | 32714.7 |
| parvulin-like peptidyl-prolyl isomerase | Cabys_3535 | A4IKU2 | - | 4227471 - 4229183 | 66604.3 |
| mfd transcription-repair coupling factor | Cabys_3536 | P37474 | - | 4229416 - 4232736 | 127409.0 |
| tetratricopeptide repeat-containing protein | Cabys_3537 | Not Available | - | 4232746 - 4233573 | 32641.5 |
| hypothetical protein | Cabys_3538 | Not Available | + | 4233739 - 4233879 | 5265.41 |
| calcineurin-like phosphoesterase | Cabys_3539 | Not Available | - | 4234300 - 4235073 | 30509.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.