Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate/3-mercaptopyruvate sulfurtransferase | Cabys_324 | Q8EJI6 | - | 374031 - 375140 | 41004.3 |
| hypothetical protein | Cabys_325 | Not Available | - | 375198 - 375404 | 7361.75 |
| 3-mercaptopyruvate sulfurtransferase ssea, contains two rhodanese domains | Cabys_326 | A5DMB6 | - | 375510 - 376493 | 36052.3 |
| pas domain s-box-containing protein | Cabys_327 | P25852 | + | 376874 - 378247 | 52259.1 |
| putative fe-mo cluster-binding protein, nifx family | Cabys_328 | Not Available | + | 378382 - 378735 | 13240.4 |
| fe-s-cluster-containing dehydrogenase component | Cabys_329 | P33389 | + | 378749 - 379639 | 33283.9 |
| ni/fe-hydrogenase 2 integral membrane subunit hybb | Cabys_330 | P37180 | + | 379642 - 380886 | 46634.0 |
| class iii cytochrome c family protein | Cabys_331 | Q9RN68 | + | 380883 - 382013 | 43128.3 |
| hamp domain-containing protein | Cabys_332 | P0DOA0 | + | 382021 - 383886 | 69562.0 |
| glycine cleavage h-protein | Cabys_333 | P0A4H9 | + | 383895 - 384680 | 29200.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.