Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Cabys_3520 | Not Available | - | 4193591 - 4196983 | 131474.0 |
| protein of unknown function (duf4159) | Cabys_3521 | Not Available | - | 4196989 - 4197633 | 24610.4 |
| protein of unknown function (duf456) | Cabys_3522 | Not Available | - | 4197837 - 4198334 | 17078.4 |
| anti-anti-sigma factor | Cabys_3523 | Q9WVX8 | - | 4198349 - 4199059 | 26050.0 |
| serine phosphatase rsbu, regulator of sigma subunit | Cabys_3524 | P40399 | - | 4199084 - 4202689 | 136993.0 |
| tetratricopeptide repeat-containing protein | Cabys_3525 | Not Available | - | 4202704 - 4204620 | 73392.1 |
| autotransporter adhesin | Cabys_3526 | P76347 | - | 4204639 - 4218771 | 504916.0 |
| hypothetical protein | Cabys_3527 | Not Available | - | 4218788 - 4219279 | 18450.3 |
| hdig domain-containing protein | Cabys_3528 | O67821 | - | 4219417 - 4221162 | 65725.5 |
| tetratricopeptide repeat-containing protein | Cabys_3529 | Not Available | - | 4221159 - 4222253 | 42338.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.