Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Cabys_3510 | Not Available | - | 4178976 - 4179890 | 34758.8 |
| hypothetical protein | Cabys_3511 | Not Available | - | 4180070 - 4181107 | 39057.2 |
| ahpc/tsa family protein | Cabys_3512 | Q5KXL9 | + | 4181253 - 4181417 | 6160.48 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_3513 | P0A1J0 | + | 4181490 - 4182026 | 20298.5 |
| hypothetical protein | Cabys_3514 | Not Available | + | 4182023 - 4182514 | 18886.9 |
| ltxxq motif family protein | Cabys_3515 | Not Available | + | 4182817 - 4183302 | 18297.3 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | Cabys_3516 | Q9F3C7 | + | 4183443 - 4184339 | 34063.3 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_3517 | F4K4R6 | + | 4184432 - 4189294 | 173748.0 |
| a/g-specific dna-adenine glycosylase | Cabys_3518 | P83847 | + | 4189837 - 4190937 | 42000.5 |
| nte family protein | Cabys_3519 | O34731 | - | 4190920 - 4193568 | 100056.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.