Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Cabys_3501 | Q58099 | - | 4166543 - 4168471 | 73144.0 |
| fic family protein | Cabys_3502 | Q8E9K5 | - | 4169259 - 4170347 | 41370.9 |
| type i restriction enzyme m protein | Cabys_3503 | Q57168 | - | 4170337 - 4171908 | 59327.3 |
| Trna-ser | Not Available | Not Available | + | 4172583 - 4172665 | Not Available |
| pp_03499 | Cabys_3504 | Not Available | - | 4173256 - 4174299 | Not Available |
| uncharacterized conserved protein (duf2203) | Cabys_3505 | Not Available | - | 4174369 - 4174716 | 13408.1 |
| (2fe-2s) ferredoxin | Cabys_3506 | O66511 | - | 4174828 - 4175142 | 11581.1 |
| 2-oxoglutarate dehydrogenase e2 component (dihydrolipoamide succinyltransferase) | Cabys_3507 | P37942 | - | 4175158 - 4176450 | 47327.7 |
| 2-oxoisovalerate dehydrogenase e1 component | Cabys_3508 | P37941 | - | 4176591 - 4178627 | 75569.2 |
| hypothetical protein | Cabys_3509 | Not Available | - | 4178653 - 4178847 | 7264.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.