Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | Cabys_3491 | Not Available | - | 4150240 - 4153965 | 139298.0 |
| hypothetical protein | Cabys_3492 | Not Available | - | 4154158 - 4155165 | 37128.4 |
| hypothetical protein | Cabys_3493 | Not Available | - | 4155219 - 4158368 | 118183.0 |
| outer membrane receptor protein, mostly fe transport | Cabys_3494 | P38370 | - | 4158423 - 4161077 | 101148.0 |
| hypothetical protein | Cabys_3495 | Not Available | + | 4161852 - 4162094 | 9034.14 |
| nadph:quinone reductase | Cabys_3496 | P34055 | + | 4162493 - 4163374 | 31828.1 |
| hypothetical protein | Cabys_3497 | Not Available | - | 4163492 - 4163641 | 5844.25 |
| transposase domain (duf772) | Cabys_3498 | Not Available | - | 4163661 - 4165247 | 61352.2 |
| hypothetical protein | Cabys_3499 | Not Available | + | 4165549 - 4165689 | 5550.76 |
| type i restriction enzyme, r subunit | Cabys_3500 | Not Available | - | 4166391 - 4166546 | 6140.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.