Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter family protein | Cabys_3481 | A8WHP3 | - | 4134732 - 4136474 | 65991.2 |
| hypothetical protein | Cabys_3482 | Not Available | + | 4136491 - 4136610 | 4453.39 |
| gxgyxy sequence motif-containing protein | Cabys_3483 | Not Available | - | 4136725 - 4138308 | 59262.2 |
| gxgyxyp putative glycoside hydrolase c-terminal domain-containing protein | Cabys_3484 | Not Available | - | 4138322 - 4139977 | 63182.3 |
| glucokinase | Cabys_3485 | B7VNU4 | - | 4140061 - 4141179 | 40594.2 |
| fucose permease | Cabys_3486 | O25788 | - | 4141208 - 4142353 | 41174.6 |
| alpha-1,2-mannosidase, putative | Cabys_3487 | O86365 | - | 4142385 - 4144688 | 87096.2 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_3488 | Not Available | - | 4144734 - 4146689 | 74726.6 |
| hypothetical protein | Cabys_3489 | Not Available | + | 4146601 - 4146726 | 4756.06 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_3490 | Not Available | - | 4146785 - 4150111 | 126304.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.