Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative gtpase | Cabys_3472 | C6A0T3 | - | 4117057 - 4118370 | 48863.6 |
| peptidase family m1 | Cabys_3473 | P55786 | - | 4119392 - 4122085 | 104380.0 |
| phosphotransferase enzyme family protein | Cabys_3474 | E8MF12 | - | 4122583 - 4123680 | 42131.4 |
| hypothetical protein | Cabys_3475 | Not Available | - | 4123658 - 4123777 | 4524.55 |
| Trna-ser | Not Available | Not Available | + | 4124088 - 4124178 | Not Available |
| hypothetical protein | Cabys_3476 | Not Available | + | 4124235 - 4124351 | 4065.94 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_3477 | E4ZJL4 | - | 4124827 - 4128345 | 130257.0 |
| parvulin-like peptidyl-prolyl isomerase | Cabys_3478 | Q0PAS1 | - | 4128705 - 4130480 | 69566.9 |
| dna-binding transcriptional regulator, laci/purr family | Cabys_3479 | Q9S470 | - | 4130549 - 4131613 | 41373.3 |
| alpha-mannosidase | Cabys_3480 | Q91W89 | - | 4131676 - 4134693 | 114970.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.