Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein involved in polysaccharide export, contains slbb domain of the beta-grasp fold | Cabys_3452 | P0A931 | - | 4097690 - 4098976 | 48397.5 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolysing) | Cabys_3453 | Q6M0B4 | - | 4098973 - 4100070 | 41114.1 |
| rnc ribonuclease-3 | Cabys_3454 | B7IUK8 | - | 4100067 - 4100861 | 30401.8 |
| 3-oxoacyl-(acyl-carrier-protein) synthase ii | Cabys_3455 | Q5HHA1 | - | 4100892 - 4102136 | 44547.1 |
| acpp acyl carrier protein | Cabys_3456 | A5FYQ3 | - | 4102380 - 4102622 | 8852.39 |
| 3-oxoacyl-(acyl-carrier-protein) reductase | Cabys_3457 | P51831 | - | 4102687 - 4103424 | 25662.2 |
| (acyl-carrier-protein) s-malonyltransferase | Cabys_3458 | P71019 | - | 4103421 - 4104347 | 33711.6 |
| fabh 3-oxoacyl-(acyl-carrier-protein) synthase iii | Cabys_3459 | Q3B6K8 | - | 4104368 - 4105384 | 36927.5 |
| plsx phosphate:acyl-(acyl carrier protein) acyltransferase | Cabys_3460 | A5D1F0 | - | 4105377 - 4106390 | 36604.8 |
| uncharacterized protein | Cabys_3461 | Q9LT27 | - | 4106613 - 4107104 | 19089.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.