Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | Cabys_3442 | P32057 | - | 4083105 - 4084346 | 47086.4 |
| putative conserved protein, heparinase superfamily | Cabys_3443 | Q59289 | - | 4085327 - 4087033 | 67025.5 |
| hypothetical protein | Cabys_3444 | Not Available | - | 4087306 - 4088151 | 32621.0 |
| sulfotransferase family protein | Cabys_3445 | Not Available | - | 4088287 - 4089123 | 33628.7 |
| putative dehydrogenase | Cabys_3446 | O05389 | - | 4089137 - 4091293 | 79633.2 |
| putative dehydrogenase | Cabys_3447 | T2KNC8 | - | 4091378 - 4092511 | 43779.7 |
| glycosyltransferase involved in cell wall bisynthesis | Cabys_3448 | Q48453 | - | 4092523 - 4093725 | 46372.9 |
| murein biosynthesis integral membrane protein murj | Cabys_3449 | Q8K9L3 | - | 4093719 - 4095209 | 56628.6 |
| o-antigen ligase like membrane protein | Cabys_3450 | Not Available | - | 4095206 - 4096504 | 49632.2 |
| g-rich domain on putative tyrosine kinase | Cabys_3451 | O52788 | - | 4096504 - 4097619 | 43091.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.