Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| myosin heavy chain | Cabys_3432 | Not Available | - | 4070279 - 4071340 | 41682.1 |
| hypothetical protein | Cabys_3433 | Not Available | - | 4071717 - 4071890 | 6614.09 |
| hypothetical protein | Cabys_3434 | Not Available | - | 4072446 - 4072577 | 4929.2 |
| udp-2-acetamido-3-amino-2,3-dideoxy-glucuronate n-acetyltransferase | Cabys_3435 | G3XD01 | - | 4072880 - 4073503 | 22786.3 |
| transposase | Cabys_3436 | Q06126 | - | 4073618 - 4074850 | 48191.4 |
| hypothetical protein | Cabys_3437 | Not Available | - | 4075057 - 4075215 | 6299.64 |
| glycosyltransferase, gt2 family | Cabys_3438 | P9WMY2 | - | 4075482 - 4077566 | 80202.8 |
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | Cabys_3439 | O34753 | - | 4077563 - 4080034 | 92929.2 |
| atp-dependent dna helicase recg | Cabys_3440 | O50224 | - | 4080057 - 4081397 | 51221.2 |
| capsule assembly protein wzi | Cabys_3441 | Not Available | - | 4081415 - 4082998 | 62354.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.