Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipid ii:glycine glycyltransferase (peptidoglycan interpeptide bridge formation enzyme) | Cabys_3390 | Not Available | - | 4033623 - 4034633 | 39707.5 |
| glycosyltransferase involved in cell wall bisynthesis | Cabys_3391 | O32272 | - | 4034626 - 4035570 | 35671.5 |
| glutathione synthase/rimk-type ligase, atp-grasp superfamily | Cabys_3392 | Not Available | - | 4035567 - 4036604 | 40913.7 |
| glutamine amidotransferase class-ii:asparagine synthase | Cabys_3393 | Not Available | - | 4036606 - 4038327 | 68114.2 |
| capsule synthesis protein pga_cap | Cabys_3394 | P96738 | - | 4038331 - 4039398 | 41599.7 |
| glycosyltransferase involved in cell wall bisynthesis | Cabys_3395 | Q58577 | - | 4039702 - 4040889 | 45980.3 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolysing) | Cabys_3396 | Q58899 | - | 4040886 - 4042061 | 45414.3 |
| hypothetical protein | Cabys_3397 | Not Available | - | 4042061 - 4042975 | 36478.8 |
| udp-2-acetamido-2,6-beta-l-arabino-hexul-4-ose reductase | Cabys_3398 | Q9XC60 | - | 4043111 - 4044229 | 43511.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | Cabys_3399 | Not Available | - | 4044226 - 4044675 | 17775.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.