Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Cabys_3350 | Not Available | - | 3985399 - 3985593 | 7398.02 |
| thioredoxin | Cabys_3351 | O51088 | + | 3985754 - 3986116 | 13762.5 |
| hypothetical protein | Cabys_3352 | Q54KF7 | + | 3986543 - 3991192 | 170452.0 |
| hypothetical protein | Cabys_3353 | Not Available | + | 3991642 - 3991815 | 6594.16 |
| long-chain acyl-coa synthetase (amp-forming) | Cabys_3354 | P44446 | + | 3991821 - 3996611 | 185654.0 |
| transcriptional regulator, tetr family | Cabys_3355 | P94548 | - | 3996608 - 3997198 | 22520.0 |
| pdz domain-containing protein | Cabys_3356 | P25152 | - | 3997450 - 4000827 | 126341.0 |
| putative zn-dependent peptidase | Cabys_3357 | Q4UML9 | - | 4000875 - 4003427 | 97543.9 |
| hypothetical protein | Cabys_3358 | Not Available | + | 4004234 - 4004887 | 25379.7 |
| hypothetical protein | Cabys_3359 | Not Available | + | 4005003 - 4005944 | 35995.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.