Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Cabys_3340 | Not Available | + | 3970073 - 3970192 | 4487.53 |
| major facilitator superfamily protein | Cabys_3341 | Not Available | + | 3970229 - 3971386 | 43798.0 |
| carboxyl-terminal processing protease | Cabys_3342 | P43669 | + | 3971753 - 3973777 | 77473.7 |
| 23s rrna (cytosine1962-c5)-methyltransferase | Cabys_3343 | Q1CA17 | + | 3974017 - 3975201 | 45292.8 |
| transposase domain (duf772) | Cabys_3344 | Not Available | + | 3975871 - 3977457 | 61382.2 |
| farnesyl-diphosphate farnesyltransferase | Cabys_3345 | P37268 | + | 3977607 - 3978644 | 40421.6 |
| 16s rrna m(5)c-1407 methyltransferase | Cabys_3346 | Q8XCL9 | + | 3978677 - 3980077 | 54035.5 |
| voltage-gated potassium channel | Cabys_3347 | Q979Z2 | + | 3980868 - 3982028 | 43234.5 |
| cyclic nucleotide-binding domain-containing protein | Cabys_3348 | O88703 | + | 3982025 - 3982564 | 20645.6 |
| hypothetical protein | Cabys_3349 | Not Available | + | 3982571 - 3984439 | 73222.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.