Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rnd family efflux transporter, mfp subunit | Cabys_3330 | D3V7P2 | - | 3956004 - 3957032 | 38108.0 |
| dna-binding transcriptional regulator, acrr family | Cabys_3331 | P94548 | - | 3957057 - 3957695 | 25208.7 |
| pas domain s-box-containing protein | Cabys_3332 | P0DOA0 | + | 3957909 - 3961745 | 145977.0 |
| hypothetical protein | Cabys_3333 | Not Available | + | 3962353 - 3962571 | 8271.09 |
| argd ornithine--oxo-acid transaminase | Cabys_3334 | C0ZBR4 | - | 3963032 - 3964237 | 44448.7 |
| 3-oxoacyl-(acyl-carrier protein) reductase | Cabys_3335 | P14802 | - | 3964268 - 3964984 | 25645.4 |
| duf4097 and duf4098 domain-containing protein yvlb | Cabys_3336 | Not Available | - | 3965689 - 3966462 | 28432.1 |
| response regulator receiver domain protein (chey-like) | Cabys_3337 | Not Available | - | 3966480 - 3968207 | 66687.0 |
| surface antigen | Cabys_3338 | Q729H8 | - | 3968234 - 3969850 | 62646.5 |
| hypothetical protein | Cabys_3339 | Not Available | - | 3969909 - 3970034 | 4449.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.