Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rlmn 23s rrna m(2)a-2503 methyltransferase | Cabys_304 | Q9X240 | + | 346187 - 347350 | 44474.2 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | Cabys_305 | P96587 | + | 347405 - 348502 | 42548.1 |
| uncharacterized membrane protein ybhn, upf0104 family | Cabys_306 | Not Available | + | 348596 - 349552 | 37031.4 |
| nuclease | Cabys_307 | Not Available | + | 349576 - 350523 | 35909.7 |
| radical sam additional 4fe4s-binding spasm domain-containing protein | Cabys_308 | Q48CT3 | + | 350552 - 351712 | 45135.9 |
| zinc transport system atp-binding protein | Cabys_309 | Not Available | - | 351967 - 352341 | 14765.0 |
| heptosyltransferase-2 | Cabys_310 | P37421 | - | 352469 - 353491 | 38724.0 |
| hypothetical protein | Cabys_311 | Not Available | - | 353711 - 355738 | 76985.8 |
| trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc family | Cabys_312 | P0AFR5 | - | 355795 - 356415 | 23131.4 |
| eama domain-containing membrane protein rard | Cabys_313 | O29470 | + | 356549 - 357424 | 32329.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.