Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Cabys_3300 | Q03629 | + | 3925362 - 3925880 | 19872.7 |
| uri superfamily endonuclease | Cabys_3301 | Q18H83 | + | 3925877 - 3926239 | 13750.8 |
| outer membrane receptor for ferrienterochelin and colicins | Cabys_3302 | Q8DD41 | + | 3926812 - 3929031 | 83425.2 |
| hypothetical protein | Cabys_3303 | Not Available | + | 3929045 - 3929257 | 7963.78 |
| carbon-nitrogen hydrolase | Cabys_3304 | Q47679 | - | 3929422 - 3930231 | 31145.3 |
| 2-keto-4-methylthiobutyrate aminotransferase apoenzyme | Cabys_3305 | P77806 | - | 3930219 - 3931370 | 43590.0 |
| hypothetical protein | Cabys_3306 | Not Available | - | 3931367 - 3931813 | 16741.1 |
| lipa lipoic acid synthetase | Cabys_3307 | Q5WDS6 | + | 3931997 - 3932959 | 36899.5 |
| transposase dde domain-containing protein | Cabys_3308 | Not Available | - | 3933146 - 3934702 | 60503.0 |
| hypothetical protein | Cabys_3309 | Not Available | - | 3934942 - 3935664 | 28241.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.