Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| meng demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | Cabys_3280 | A5GA37 | - | 3902567 - 3903301 | 27973.6 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | Cabys_3281 | Q9KP38 | - | 3903294 - 3903899 | 22108.8 |
| 4-hydroxybenzoate polyprenyltransferase | Cabys_3282 | A4SZT5 | - | 3903896 - 3904768 | 32534.6 |
| cytosine/adenosine deaminase | Cabys_3283 | Q8R9L4 | - | 3904759 - 3905952 | 44349.6 |
| mqnc de-hypoxanthine futalosine cyclase | Cabys_3284 | Q9K864 | - | 3905954 - 3907021 | 40798.8 |
| mqna chorismate dehydratase | Cabys_3285 | Q9L0T8 | - | 3907008 - 3907877 | 32825.3 |
| mqne aminodeoxyfutalosine synthase | Cabys_3286 | Q5SK48 | - | 3907891 - 3908994 | 41790.4 |
| tetratricopeptide repeat-containing protein | Cabys_3287 | P0AGC4 | - | 3909622 - 3911853 | 89289.0 |
| pa domain-containing protein | Cabys_3288 | Q17QK3 | - | 3912106 - 3913512 | 52367.4 |
| hypothetical protein | Cabys_3289 | Not Available | - | 3913513 - 3914109 | 23214.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.