Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | Cabys_3260 | P76339 | - | 3883334 - 3884611 | 49774.8 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | Cabys_3261 | Q4L6C6 | - | 3884649 - 3885323 | 25947.2 |
| rna polymerase-binding protein dksa | Cabys_3262 | O66611 | - | 3885411 - 3885779 | 14554.3 |
| hypothetical protein | Cabys_3263 | Not Available | + | 3886307 - 3886426 | 4557.85 |
| 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase | Cabys_3264 | Q96XE0 | - | 3886506 - 3887540 | 37377.4 |
| homoserine dehydrogenase | Cabys_3265 | Q58997 | - | 3887537 - 3888583 | 38715.5 |
| hypothetical protein | Cabys_3266 | Not Available | - | 3888595 - 3889056 | 18133.5 |
| serc phosphoserine aminotransferase apoenzyme | Cabys_3267 | B8FLC3 | + | 3889189 - 3890274 | 39912.2 |
| hypothetical protein | Cabys_3268 | Not Available | + | 3890323 - 3890448 | 4965.01 |
| hypothetical protein | Cabys_3269 | Not Available | - | 3890909 - 3891025 | 4338.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.