Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | Cabys_3250 | Q06067 | - | 3872505 - 3873890 | 52579.1 |
| serpin b | Cabys_3251 | Q8TNN7 | - | 3874095 - 3875354 | 47849.6 |
| serpin b | Cabys_3252 | Q5I0S8 | - | 3875418 - 3876641 | 46069.1 |
| hypothetical protein | Cabys_3253 | Not Available | - | 3876665 - 3876781 | 4570.54 |
| hypothetical protein | Cabys_3254 | Not Available | - | 3876849 - 3878630 | 70735.3 |
| homoserine dehydrogenase | Cabys_3255 | Q58997 | + | 3878814 - 3879842 | 37238.1 |
| hypothetical protein | Cabys_3256 | Not Available | - | 3879981 - 3880175 | 7398.84 |
| alanine or glycine:cation symporter, agcs family | Cabys_3257 | Q6LX42 | + | 3880199 - 3881701 | 52682.1 |
| hypothetical protein | Cabys_3258 | Not Available | - | 3881937 - 3882065 | 4671.76 |
| hypothetical protein | Cabys_3259 | Not Available | - | 3882276 - 3882719 | 16165.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.