Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transposase domain (duf772) | Cabys_3240 | Not Available | + | 3862319 - 3863698 | 53099.8 |
| transposase | Cabys_3241 | Not Available | - | 3863763 - 3865559 | 70253.2 |
| hypothetical protein | Cabys_3242 | Not Available | - | 3865814 - 3865945 | 5046.4 |
| spermidine synthase | Cabys_3243 | Q2RHH3 | - | 3865989 - 3867269 | 48158.6 |
| hypothetical protein | Cabys_3244 | Not Available | - | 3867355 - 3867474 | 4585.63 |
| pilz domain-containing protein | Cabys_3245 | Not Available | + | 3867607 - 3867951 | 13769.6 |
| protein n-acetyltransferase, rimj/riml family | Cabys_3246 | Q9KL03 | + | 3867982 - 3868530 | 21287.6 |
| hypothetical protein | Cabys_3247 | Not Available | - | 3869169 - 3870119 | 37176.6 |
| hypothetical protein | Cabys_3248 | Not Available | - | 3870186 - 3871130 | 35949.6 |
| two-component system, ntrc family, response regulator/two-component system, ntrc family, response regulator hydg | Cabys_3249 | P25852 | - | 3871127 - 3872503 | 51739.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.