Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase maturation protease | Cabys_3230 | P19930 | + | 3846710 - 3847177 | 16852.5 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | Cabys_3231 | P13792 | + | 3847152 - 3847538 | 14592.7 |
| his kinase a (phospho-acceptor) domain-containing protein | Cabys_3232 | P23545 | + | 3847834 - 3849186 | 51494.7 |
| act domain-containing protein | Cabys_3233 | O67221 | + | 3849204 - 3849668 | 17194.9 |
| pas domain s-box-containing protein | Cabys_3234 | Q4ZSY3 | - | 3849688 - 3852468 | 106152.0 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_3235 | Not Available | - | 3852524 - 3857695 | 188811.0 |
| hypothetical protein | Cabys_3236 | Not Available | - | 3857712 - 3858242 | 19996.2 |
| serine/threonine protein kinase | Cabys_3237 | Q8XJL8 | - | 3858380 - 3860707 | 87602.3 |
| adp-glyceromanno-heptose 6-epimerase precursor | Cabys_3238 | A1VGB0 | - | 3860892 - 3861854 | 37103.3 |
| hypothetical protein | Cabys_3239 | Not Available | + | 3861911 - 3862057 | 5618.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.