Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative endonuclease | Cabys_3210 | Q49UZ7 | - | 3823329 - 3823571 | 9756.56 |
| hypothetical protein | Cabys_3211 | Not Available | + | 3824029 - 3824169 | 5347.96 |
| phosphomannomutase | Cabys_3212 | Q8TWY8 | + | 3824216 - 3825565 | 49499.8 |
| deoc deoxyribose-phosphate aldolase | Cabys_3213 | A8AX59 | + | 3825578 - 3826414 | 29632.8 |
| outer membrane protein beta-barrel domain-containing protein | Cabys_3214 | Not Available | + | 3827398 - 3828018 | 23775.8 |
| outer membrane protein beta-barrel domain-containing protein | Cabys_3215 | Not Available | + | 3828034 - 3828711 | 25960.7 |
| putative transcriptional regulator | Cabys_3216 | Q57720 | + | 3829181 - 3829411 | 8844.61 |
| hypothetical protein | Cabys_3217 | Not Available | + | 3829408 - 3830085 | 25922.2 |
| hypothetical protein | Cabys_3218 | Not Available | + | 3830082 - 3830561 | 18011.0 |
| uracil-dna glycosylase | Cabys_3219 | B6YR15 | + | 3830811 - 3831530 | 27820.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.