Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyrd dihydroorotate oxidase b, catalytic subunit | Cabys_3161 | O27281 | - | 3768844 - 3769761 | 32472.4 |
| pyri aspartate carbamoyltransferase regulatory subunit | Cabys_3162 | P77919 | - | 3769770 - 3770249 | 18053.6 |
| pyrb aspartate carbamoyltransferase | Cabys_3163 | O58451 | - | 3770246 - 3771166 | 34709.1 |
| orotidine-5'-phosphate decarboxylase | Cabys_3164 | O26232 | - | 3771341 - 3772027 | 25296.6 |
| pyre orotate phosphoribosyltransferase | Cabys_3165 | A1AXP4 | - | 3772031 - 3772675 | 24283.2 |
| dihydroorotase | Cabys_3166 | B1GYY7 | - | 3772650 - 3773924 | 48426.4 |
| histidinol dehydrogenase/leucyl-trna synthetase | Cabys_3167 | P44116 | - | 3774867 - 3775034 | 6558.18 |
| purf amidophosphoribosyltransferase | Cabys_3168 | P0AG16 | - | 3775410 - 3776843 | 53635.7 |
| purn formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase | Cabys_3169 | P12040 | - | 3776853 - 3777449 | 22318.1 |
| purd phosphoribosylamine--glycine ligase | Cabys_3170 | Q97J90 | - | 3777446 - 3778693 | 45529.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.