Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transposase | Cabys_3141 | Q06126 | - | 3747845 - 3749077 | 48229.5 |
| transposase | Cabys_3142 | Not Available | - | 3749087 - 3750670 | 61733.0 |
| hypothetical protein | Cabys_3143 | Not Available | + | 3750861 - 3751007 | 5739.92 |
| histidine ammonia-lyase | Cabys_3144 | A6TSX0 | + | 3751628 - 3753151 | 55160.2 |
| ste24 endopeptidase | Cabys_3145 | P40769 | - | 3753293 - 3754426 | 43787.8 |
| alpha-aminoadipate carrier protein lysw | Cabys_3146 | Q5SH22 | + | 3754884 - 3755060 | 6400.39 |
| homocitrate synthase | Cabys_3147 | O59390 | + | 3755064 - 3756215 | 42198.9 |
| l-2-aminoadipate n-acetyltransferase | Cabys_3148 | Q5SH23 | + | 3756272 - 3757120 | 31201.8 |
| argc n-acetyl-gamma-glutamyl-phosphate reductase | Cabys_3149 | B9KZP8 | + | 3757117 - 3758163 | 38811.6 |
| glutamine amidotransferase | Cabys_3150 | P54004 | + | 3758313 - 3758954 | 24760.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.