Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Cabys_284 | Not Available | + | 315917 - 317191 | 47441.5 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_285 | Not Available | + | 317298 - 319913 | 94823.7 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_286 | O35015 | + | 320143 - 322530 | 90191.4 |
| wd40-like beta propeller repeat | Cabys_287 | Not Available | + | 322543 - 323475 | 35150.4 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_288 | P37134 | + | 323488 - 326214 | 103375.0 |
| atp-dependent dna helicase, recq-like | Cabys_289 | P15043 | + | 326392 - 328488 | 79222.1 |
| putative rossmann fold nucleotide-binding protein dpra/smf involved in dna uptake | Cabys_290 | P43862 | + | 328525 - 329841 | 48821.6 |
| 3-ketoacyl-coa thiolase | Cabys_291 | Q3IEE3 | + | 330182 - 331471 | 46624.8 |
| short chain enoyl-coa hydratase /3-hydroxyacyl-coa dehydrogenase | Cabys_292 | Q7MIS5 | + | 331523 - 333532 | 75786.6 |
| electron transfer flavoprotein beta subunit | Cabys_293 | P94550 | + | 333616 - 334365 | 27443.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.