Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf3341) | Cabys_3111 | Not Available | - | 3711489 - 3712049 | 20566.7 |
| quinol:cytochrome c oxidoreductase quinone-binding subunit 1 | Cabys_3112 | Q9HR72 | - | 3712046 - 3713458 | 54012.0 |
| quinol:cytochrome c oxidoreductase iron-sulfur protein precursor | Cabys_3113 | Q72E85 | - | 3713455 - 3716442 | 110449.0 |
| cytochrome c7 | Cabys_3114 | P0DOV3 | - | 3716439 - 3717086 | 23946.8 |
| ctab protoheme ix farnesyltransferase | Cabys_3115 | A1URX1 | - | 3717207 - 3718070 | 32580.8 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_3116 | Not Available | + | 3718441 - 3720816 | 88855.7 |
| hd domain-containing protein | Cabys_3117 | O67821 | + | 3720908 - 3721597 | 26385.3 |
| hypothetical protein | Cabys_3118 | Not Available | - | 3721587 - 3722330 | 28434.9 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_3119 | Q5U504 | - | 3722347 - 3723603 | 46822.5 |
| serine/threonine protein kinase | Cabys_3120 | Q8XJL8 | - | 3723658 - 3725259 | 60303.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.