Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein sco1/2 | Cabys_3101 | P47206 | - | 3703044 - 3703634 | 22212.1 |
| cytochrome c oxidase assembly protein subunit 15 | Cabys_3102 | Q5L115 | - | 3703631 - 3704557 | 34111.3 |
| cytochrome c oxidase subunit iv | Cabys_3103 | Not Available | - | 3704843 - 3705244 | 14725.3 |
| cytochrome c oxidase subunit 3 | Cabys_3104 | P50677 | - | 3705251 - 3705901 | 25052.0 |
| cytochrome c oxidase subunit 1 | Cabys_3105 | P50676 | - | 3705933 - 3707579 | 61787.9 |
| cytochrome c oxidase subunit 2 | Cabys_3106 | Q04441 | - | 3707586 - 3708536 | 35442.2 |
| protein sco1/2 | Cabys_3107 | Not Available | - | 3708533 - 3709354 | 30726.3 |
| hypothetical protein | Cabys_3108 | Not Available | - | 3709356 - 3709682 | 12581.2 |
| hypothetical protein | Cabys_3109 | Not Available | - | 3709702 - 3710880 | 45263.3 |
| cytochrome c oxidase, cbb3-type, subunit iii | Cabys_3110 | A4VND8 | - | 3710900 - 3711469 | 21547.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.