Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| slbb domain-containing protein | Cabys_3093 | Not Available | - | 3693555 - 3694052 | 18649.7 |
| capsular exopolysaccharide family | Cabys_3094 | P58593 | - | 3694073 - 3696424 | 88585.9 |
| selenocysteine lyase/cysteine desulfurase | Cabys_3095 | P42253 | - | 3696604 - 3697728 | 42733.5 |
| cupin domain protein | Cabys_3096 | Q59013 | + | 3697877 - 3698230 | 13407.5 |
| putative endonuclease | Cabys_3097 | A8F902 | - | 3698420 - 3698662 | 9739.55 |
| Trna-ser | Not Available | Not Available | + | 3698664 - 3698751 | Not Available |
| Trna-ser | Not Available | Not Available | + | 3699675 - 3699759 | Not Available |
| cobalt-zinc-cadmium efflux system protein | Cabys_3098 | O07084 | + | 3699980 - 3700819 | 30665.0 |
| xaa-pro aminopeptidase | Cabys_3099 | P12955 | + | 3700843 - 3702231 | 52310.5 |
| putative membrane protein | Cabys_3100 | O31845 | - | 3702634 - 3703047 | 16043.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.