Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | Cabys_3003 | P0DOA0 | + | 3579474 - 3584318 | 184539.0 |
| translation initiation factor 1 (eif-1/sui1) | Cabys_3004 | P0A2G8 | - | 3584723 - 3585043 | 11731.2 |
| nadph-dependent glutamate synthase beta chain | Cabys_3005 | O34399 | - | 3585043 - 3586380 | 50985.8 |
| transglutaminase-like enzyme, putative cysteine protease | Cabys_3006 | Not Available | - | 3586519 - 3587943 | 56179.0 |
| nitroreductase | Cabys_3007 | Q8GED9 | - | 3587964 - 3588542 | 21396.0 |
| pimeloyl-acp methyl ester carboxylesterase | Cabys_3008 | Q6DRD9 | - | 3588743 - 3589585 | 32435.3 |
| cation:h+ antiporter | Cabys_3009 | Q0ZAI3 | + | 3589716 - 3590639 | 33235.7 |
| seca protein translocase subunit seca | Cabys_3010 | B3QXR7 | - | 3591113 - 3594085 | 114563.0 |
| putative phosphodiesterase | Cabys_3011 | Q58322 | - | 3594092 - 3594802 | 27067.6 |
| nusb nusb antitermination factor | Cabys_3012 | B3QLL5 | - | 3594814 - 3595266 | 17542.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.