Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Cabys_2993 | Not Available | - | 3567337 - 3567963 | 23673.6 |
| trap transporter, dctm subunit | Cabys_2994 | Q9HU16 | - | 3567984 - 3569264 | 46445.6 |
| trap-type c4-dicarboxylate transport system, small permease component | Cabys_2995 | Q9KQS0 | - | 3569261 - 3569752 | 18923.9 |
| hypothetical protein | Cabys_2996 | Not Available | + | 3570178 - 3570807 | 24079.9 |
| atp-dependent dna helicase ding | Cabys_2997 | P54394 | + | 3571063 - 3574050 | 115389.0 |
| huth histidine ammonia-lyase | Cabys_2998 | Q8RBH4 | + | 3574040 - 3575578 | 55832.9 |
| hypothetical protein | Cabys_2999 | Not Available | + | 3575605 - 3576009 | 15084.4 |
| nuclease | Cabys_3000 | Not Available | - | 3576006 - 3577115 | 42245.9 |
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | Cabys_3001 | P42978 | - | 3577964 - 3578896 | 34363.8 |
| hypothetical protein | Cabys_3002 | Not Available | - | 3579025 - 3579204 | 7168.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.