Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| four helix bundle suffix domain-containing protein | Cabys_2963 | Not Available | + | 3534805 - 3535467 | 25441.4 |
| type i restriction enzyme, r subunit | Cabys_2964 | Q60295 | + | 3535464 - 3538472 | 114306.0 |
| transposase | Cabys_2965 | Not Available | - | 3538878 - 3540638 | 68861.9 |
| hypothetical protein | Cabys_2966 | Not Available | + | 3540691 - 3540807 | 4591.75 |
| d-alanine transaminase | Cabys_2967 | P54692 | - | 3541518 - 3542363 | 31785.3 |
| l-aminopeptidase dmpa, serine peptidase, merops family s58 | Cabys_2968 | A0MTQ2 | - | 3542360 - 3543505 | 40382.2 |
| hypothetical protein | Cabys_2969 | Not Available | - | 3543591 - 3543740 | 5914.54 |
| ornithine carbamoyltransferase | Cabys_2970 | Q5JI16 | + | 3543718 - 3544635 | 34322.3 |
| hypothetical protein | Cabys_2971 | Not Available | - | 3544717 - 3545625 | 33618.6 |
| hypothetical protein | Cabys_2972 | Not Available | - | 3545635 - 3546582 | 35164.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.