Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 7, 8-dihydropterin-6-yl-methyl-4-(beta-d- ribofuranosyl)aminobenzene 5'-phosphate synthase | Cabys_165 | Q57749 | + | 194934 - 195770 | 31213.7 |
| dcmp deaminase | Cabys_166 | P32393 | + | 195841 - 196287 | 16496.2 |
| hypothetical protein | Cabys_167 | B0C2Z9 | - | 196362 - 196814 | 16865.4 |
| hypothetical protein | Cabys_168 | Not Available | + | 197164 - 197280 | 4205.02 |
| hypothetical protein | Cabys_169 | Not Available | - | 197509 - 197667 | 5934.52 |
| alpha amylase, catalytic domain | Cabys_170 | L8B068 | - | 197668 - 199062 | 54268.3 |
| fumc fumarase, class ii | Cabys_171 | Q8DIP7 | - | 199155 - 200540 | 50597.9 |
| fumarate hydratase, class i | Cabys_172 | Q04718 | - | 200626 - 201210 | 21476.9 |
| fumarate hydratase, class i | Cabys_173 | Q04718 | - | 201200 - 202069 | 32176.3 |
| hypothetical protein | Cabys_174 | Not Available | - | 202270 - 202530 | 9867.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.