Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nagb glucosamine-6-phosphate deaminase | Cabys_1347 | A6L7Q8 | + | 1571637 - 1572449 | 30777.9 |
| protein of unknown function (duf4954) | Cabys_1348 | O83823 | + | 1572564 - 1574537 | 74031.8 |
| undecaprenyl-diphosphatase | Cabys_1349 | Q57819 | + | 1575654 - 1576184 | 19991.2 |
| glycosyl hydrolase family 1 | Cabys_1350 | B9K7M5 | + | 1576202 - 1577482 | 50630.6 |
| ceramide glucosyltransferase | Cabys_1351 | Q5U4S8 | + | 1577630 - 1578784 | 43680.6 |
| hypothetical protein | Cabys_1352 | Not Available | + | 1578803 - 1578982 | 6828.49 |
| glycosyltransferase involved in cell wall bisynthesis | Cabys_1353 | A0QRG8 | - | 1579267 - 1580430 | 44423.9 |
| tpr repeat-containing protein | Cabys_1354 | Not Available | + | 1580878 - 1582368 | 57117.8 |
| hypothetical protein | Cabys_1355 | Not Available | + | 1582371 - 1582868 | 18874.5 |
| caax protease self-immunity | Cabys_1356 | Not Available | + | 1582989 - 1583642 | 23786.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.